Michele Guerini Rocco
0cf1ab2e8d
src/dispersion.f90: mark colddisp a pure function
2022-05-19 19:00:54 +02:00
Michele Guerini Rocco
3cee84690c
src/dispersion.f90: mark zetac as pure
2022-05-11 01:15:08 +02:00
Michele Guerini Rocco
c3f8cb1921
default.nix: update to Nixpkgs 21.11
2022-05-11 01:15:08 +02:00
Michele Guerini Rocco
cd6966f1b4
default.nix: prevent nixpkgs tarball GC
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When adding a GC root with `nix-build -A inputDerivation` the Nixpkgs
tarball wasn't being saved because it's technically not a build input.
2022-05-11 01:15:08 +02:00
Michele Guerini Rocco
3f79a6e9cd
skip print_headers with no active units
2022-05-11 01:15:07 +02:00
Michele Guerini Rocco
281a649212
Makefile: fix default PREFIX
2022-05-11 01:15:07 +02:00
Michele Guerini Rocco
d52fee084b
Makefile: fix gray.1 not being generated in all
2022-05-11 01:15:07 +02:00
Michele Guerini Rocco
aea31018a9
Revert "Change documentation formatting"
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This reverts commit 10ab2d73.
The change broke the generation of the manual with help2man.
2022-05-11 01:15:07 +02:00
Michele Guerini Rocco
e81308d048
add option to set parameters from the command-line
2022-05-11 01:15:07 +02:00
Michele Guerini Rocco
3e49247d15
src/main.f90: fix typo
2022-05-11 01:15:06 +02:00
a2d4c25bb2
Change documentation formatting
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Revert temporarily to default fonts to improve portability.
Add section header markers to the man page.
2022-05-11 01:15:06 +02:00
9a6063389e
Add wave frequency to parameters stored in file headers
2022-05-11 01:15:06 +02:00
efd4fc51e5
src/gray_params.f90: improve handling of absolute paths
2022-05-11 01:15:06 +02:00
d3a87e1044
Close open units on exit to flush the buffer
2022-05-11 01:15:05 +02:00
b379a20192
Makefile: change docs rule to make it work on macOS
2022-05-11 01:15:05 +02:00
Michele Guerini Rocco
6938d8c061
Makefile: make the .d rule portable
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The \+ syntax is not POSIX and supported only by GNU sed.
This changes both the grep and sed commands to use extended regex.
Note: sed -E option is not POSIX either, but widely supported.
2022-05-11 01:15:05 +02:00
Michele Guerini Rocco
a30cd09e8e
src/math.f90: use the intrinsic gamma function
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- remove the `gamm` function
- rewrite `fact` in terms of `gamma`
2022-05-11 01:15:05 +02:00
Michele Guerini Rocco
98599b2b7d
src/dispersion.f90: compute factorials incrementally
2022-05-11 01:15:05 +02:00
Michele Guerini Rocco
91a2e6cf07
src: implement toggling of output units
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This actually implements the --units option
2022-05-11 01:15:04 +02:00
Michele Guerini Rocco
96359bc3fd
src: use hypot and norm2 when possible
2022-05-11 01:15:04 +02:00
Michele Guerini Rocco
18c1126d28
src/gray_params.f90: improve print_parameters
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- add all missing parameters (not *data*)
- use shorter formatting
2022-05-11 01:15:04 +02:00
Michele Guerini Rocco
add59dbdda
src: use the logging system everywhere
2022-05-11 01:15:04 +02:00
Michele Guerini Rocco
f2f41ec023
src/logger.f90: init
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This change adds a minimal logging system. The log messages carry a
timestamp in μs, the identifier of the emitter (fortran module +
procedure) and a log level. For simplicity the format is hardcoded.
2022-05-11 01:15:04 +02:00
Michele Guerini Rocco
ed0917aa8c
src/conical.f90: eliminate dead code
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Use the intrinsic functions when possible (bessel_j0, bessel_j1) and
remove other unused functions.
2022-05-11 01:15:03 +02:00
Michele Guerini Rocco
ef1617713f
src: simplify handling of free units
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This changes the behavior of `get_free_unit` to simplify the handling of
optional unit numbers.
2022-05-11 01:15:03 +02:00
Michele Guerini Rocco
095ee7ecf2
default.nix: exlcude result from source
2022-05-11 01:15:03 +02:00
Michele Guerini Rocco
da1ddd186e
default.nix: enable parallel build
2022-05-11 01:15:03 +02:00
Michele Guerini Rocco
5a8e64a595
Makefile: fix shell quoting
2022-05-11 01:15:03 +02:00
Michele Guerini Rocco
9a39251f44
doc/gray.1 generate from gray --help
2022-05-11 01:15:02 +02:00
Michele Guerini Rocco
01a6f9145c
initial gray CLI work
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This lays down the basis for the gray command-line interface.
All options works but currently --units and -v/-q have no effect.
2022-05-11 01:15:02 +02:00
Michele Guerini Rocco
93d936ce24
Makefile: ignore instrisic modules
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This excludes intristic modules like `iso_fortran_env` from the
automatic generation of the prerequisites.
2022-05-11 01:15:02 +02:00
Michele Guerini Rocco
2bee7be103
src/graycore.f90 -> src/gray_core.f90
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Rename for consistency with other modules.
2022-05-11 01:15:02 +02:00
Michele Guerini Rocco
d18e05353a
src: remove unused parameters
2022-05-11 01:15:02 +02:00
Michele Guerini Rocco
7818ac731c
src/gray_jetto1beamf90: update for graycore changes
2022-05-11 01:15:01 +02:00
Michele Guerini Rocco
f56e1cbc05
src/coreprofiles.f90: use derived types
2022-05-11 01:15:01 +02:00
Michele Guerini Rocco
948a512254
src: use derived type arguments (work in progress)
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This change structures the arguments of most functions, in particular
gray_main, into well-defined categories using derived types.
All types are defined in the gray_params.f90 (location subject to
change) and are organised as follows:
gray_parameters (statically allocated data)
├── antenna_parameters
├── ecrh_cd_parameters
├── equilibrium_parameters
├── misc_parameters
├── output_parameters
├── profiles_parameters
└── raytracing_parameters
gray_data - inputs of gray_main (dynamically-allocated arrays)
├── equilibrium_data
└── profiles_data
gray_results - outputs of gray_main (dynamically-allocated arrays)
2022-05-11 01:15:01 +02:00
Michele Guerini Rocco
4f867bad14
src/magsurf_data.f90: fix memory leak
2022-05-11 01:15:01 +02:00
Michele Guerini Rocco
b1694bc575
src/pec.f90: fix uninitialised memory use
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If the condition `sccsa > zero` is not met, ratj{a,b}mx remain
unitialised and print_finals may write them to fort.7.
2022-05-11 01:15:00 +02:00
Michele Guerini Rocco
5a50ce1cef
Makefile: add debug option
2022-05-11 01:15:00 +02:00
Michele Guerini Rocco
d9b03fc5e6
doc/3.io-files.md: fix some inconsistencies in gray_params
2022-05-11 01:15:00 +02:00
Michele Guerini Rocco
78c96c7648
doc/2.physics.md: fix equation spacing
2022-05-11 01:15:00 +02:00
Michele Guerini Rocco
712260ae26
doc/3.io-files.md: all angles are in degrees
2022-05-11 01:15:00 +02:00
Michele Guerini Rocco
58ee0bdc1b
doc: add anchor links to headings
2022-05-11 01:14:59 +02:00
Michele Guerini Rocco
861a723ebc
src/equilibrium.f90: fix mixed tab/spaces
2022-05-11 01:14:59 +02:00
Michele Guerini Rocco
08dad4ff45
add documentation
2021-12-15 02:30:58 +01:00
Michele Guerini Rocco
bfbd479d20
src/const_and_precisions.f90: clean up
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- formatting
- remove commented out constants
- remove constants not used anywhere in GRAY
2021-12-15 02:30:56 +01:00
Michele Guerini Rocco
693af2a763
merge graysum and gray
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Note that graysum, now as sum_mode, still doesn't support multipass.
2021-12-15 02:30:55 +01:00
Michele Guerini Rocco
37ee881024
src/gray-externals.f90: remove
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Apparently, this module only constains old unused routines.
2021-12-15 02:30:54 +01:00
Michele Guerini Rocco
1648a7878a
src/gray_params.f90: handle file not found error
2021-12-15 02:30:53 +01:00
Michele Guerini Rocco
023facac6b
src/gray_params.f90: formatting
2021-12-15 02:30:52 +01:00
